proposal: a new mailing list for biomedical postgresql ( pgsql-bio )
От | Erik |
---|---|
Тема | proposal: a new mailing list for biomedical postgresql ( pgsql-bio ) |
Дата | |
Msg-id | 9756.156.83.1.183.1223223685.squirrel@webmail.xs4all.nl обсуждение исходный текст |
Ответы |
Re: proposal: a new mailing list for biomedical postgresql
( pgsql-bio )
Re: proposal: a new mailing list for biomedical postgresql ( pgsql-bio ) |
Список | pgsql-www |
Dear all, I would like to propose a dedicated mailing list for the usage of PostgreSQL in biological/biomedical application - a good name might be "pgsql-bio". a little background: In biomedical research, there are often two main sources of data: On the one hand, locally-produced experimental data from an ever-growing array of data-spewing machinery (e.g. high-throughput sequencing; mass spectrometry; microarrays). On the other hand, there are large biomedical databases freely downloadable (e.g.: NCBI; ensembl.org; hapmap.org; many, many others). (science publications are increasingly obliged to provide (raw) data as well.) Work for the (database) programmer often involves joining the locally produced experimental data to (local copies of) the huge public databases. (Biologists refer to this as "annotation"). The preparation of such "annotation" databases can be the same for many research groups. In combination with the possibility of example code on a bioinformatics section of the wiki, a mailing list could provide a platform to discuss ways to prepare such databases, & their respective applications. Thanks, Erik Rijkers Erasmus University Medical Center Rotterdam (Netherlands)
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